Abstracts and Unpublished Presentations

S. Al Seesi

S. Al Seesi, Computational methods for genomics-guided immunotherapy, CICATS Science Cafe, Oct. 9, 2015, ppt, url

S. Al Seesi and I.I. Mandoiu, Computational methods for genomics-guided immunotherapy, Mini-tutorial at 11th International Symposium on Bioinformatics Research and Applications, Norfolk, VA, June 7-10, 2015, ppt, url

D.K.P. Karunakaran and S. Al Seesi and A. Rouf Banday and M. Baumgartner and A. Olthof and C. Lemoine and I.I. Mandoiu and Rahul Kanadia, Network-based bioinformatics analysis of spatio-temporal RNAseq data reveals transcriptional programs underpinning normal and aberrant retinal development, 11th International Symposium on Bioinformatics Research and Applications, Norfolk, VA, June 7-10, 2015, abstract, url

F. Duan and J. Duitama and S. Al Seesi and C. Ayres and S. Corcelli and A. Pawashe and T. Blanchard and D. McMahon and J. Sidney and A. Sette and B. Baker and I.I. Mandoiu and P.K. Srivastava, Genomic and bioinformatic profiling of mutational neo-epitopes reveals new rules to predict anti-cancer immunogenicity, Poster at ImmunoGenomics Symposium at The Jackson Laboratory for Genomic Medicine, Nov 12-14, 2014, ppt, abstract, url

S. Al Seesi and Y.T. Tiagueu and A. Zelikovsky and I.I. Mandoiu, Accurate differential gene expression analysis for RNA-Seq data without replicates, 9th International Symposium on Bioinformatics Research and Applications, May 20-22, 2013, ppt, abstract, url

S. Mangul and S. Al Seesi and A. Caciula and D. Brinza and I.I. Mandoiu and A. Zelikovsky, Transcriptome Assembly and Quantification from Ion Torrent RNA-Seq Data, Proc. 3rd IEEE International Conference on Computational Advances in Bio and Medical Sciences, June 12-14, 2013, ppt, abstract, url

S. Al Seesi and I.I. Mandoiu, Inference of allele specific expression levels from RNA-Seq data, Poster at 8th International Symposium on Bioinformatics Research and Applications, May 21-23, 2012, ppt, abstract, url

S. Al Seesi and I.I. Mandoiu, Inference of allele specific expression levels from RNA-Seq data, Proc. 2nd IEEE International Conference on Computational Advances in Bio and Medical Sciences, Feb. 23-25, 2012, ppt, abstract, url

R.J. O'Neill and J. Lindsay and D. Carone and T. Heider and S. Al Seesi and I.I. Mandoiu and A. Pask, The Utility of Next Generation Sequencing for Genome Scale Studies, Proc. 1st IEEE International Conference on Computational Advances in Bio and Medical Sciences, Feb. 3-5, 2011, abstract, url

I.I. Mandoiu and S. Al Seesi, Bioinformatics Pipelines for RNA-Seq Data Analysis, Tutorial at 5th IEEE International Conference on Bioinformatics and Biomedicine, Atlanta GA, Nov. 12-15, 2011, ppt, url