Projects
Active Research Grants
- Algorithmic Techniques for Inferring Transmission Networks from Noisy Sequencing Data
- Computational framework for inference of metabolic pathway activity from RNA-seq data
Completed Research Grants
- Bioinformatics Tools for Viral Quasispecies Reconstruction from Next-Generation Sequencing Data and Vaccine Optimization
- Reconstruction of Haplotype Spectra from High-Throughput Sequencing Data
- Novel transcript reconstruction from ION Torrent sequencing reads
- Software for robust transcript discovery and quantification from sequencing data
- CAREER: Combinatorial Algorithms for High-Throughput Collection and Analysis of Genomic Diversity Data
- Bioinformatics Tools Enabling Large-Scale DNA Barcoding
- The Mechanism of Phenotypic Drift in hES Cells
- Primer Selection Algorithms for Cost-Effective DNA Amplification by Multiplex PCR