B. Tork

Book Chapters:

E. Nenastyeva and B. Tork and A. Artyomenko and N. Mancuso and M.I. Khan and R. O'Neill and I.I. Mandoiu and A. Zelikovsky, Reconstruction of Infectious Bronchitis Virus Quasispecies from NGS Data, In I.I. Mandoiu and A. Zelikovsky, Computational Methods for Next Generation Sequencing Data Analysis, John Wiley & Sons, pp. 383-400, 2016, publisher url, bibtex

I. Astrovskaya and N. Mancuso and B. Tork and S. Mangul and A. Artyomenko and P. Skums and L. Ganova-Raeva and I.I. Mandoiu and A. Zelikovsky, Inferring Viral Quasispecies Spectra from Shotgun and Amplicon Next-Generation Sequencing Reads, In Maria Poptsova, Genome Analysis: Current Procedures and Applications, Caister Academic Press, pp. 231-262, 2014, publisher url, bibtex

Journal Articles:

P. Skums and N. Mancuso and A. Artyomenko and B. Tork and I.I. Mandoiu and Y. Khudyakov and A. Zelikovsky, Reconstruction of Viral Population Structure from Next-Generation Sequencing Data Using Multicommodity Flows, BMC Bioinformatics 14(Suppl 9):S2, 2013, pdf preprint, publisher url, bibtex

N. Mancuso and B. Tork and P. Skums and L. Ganova-Raeva and I.I. Mandoiu and A. Zelikovsky, Reconstructing viral quasispecies from NGS amplicon reads, In Silico Biology 11, pp. 237-249, 2012, publisher url, bibtex

I. Astrovskaya and B. Tork and S. Mangul and K. Westbrooks and I.I. Mandoiu and P. Balfe and A. Zelikovsky, Inferring Viral Quasispecies Spectra from 454 Pyrosequencing Reads, BMC Bioinformatics 12(Suppl 6):S1, 2011, pdf preprint, publisher url, bibtex

Conference Articles:

N. Mancuso and B. Tork and I.I. Mandoiu and P. Skums and A. Zelikovsky, Viral Quasispecies Reconstruction from Amplicon 454 Pyrosequencing Reads, Proc. 1st Workshop on Computational Advances in Molecular Epidemiology, pp. 94-101, 2011, publisher url, ppt, bibtex

S. Mangul and I. Astrovskaya and M. Nicolae and B. Tork and I.I. Mandoiu and A. Zelikovsky, Maximum Likelihood Estimation of Incomplete Genomic Spectrum from HTS Data, Proc. 11th Workshop on Algorithms in Bioinformatics, pp. 213-224, 2011, pdf preprint, publisher url, bibtex