|
|
IWBRA 2005, Emory University, Atlanta, USA,
May 22-25, 2005
Disjoint Segments with Maximum Densityby Hsueh-I Lu, Yen Hung Chen, Chuan Yi TangPresenter: Yen Hung Chen, Department of Computer Science, National Tsing Hua University, Re What makes the ARC-Preserving Subsequence problem hard?by Guillaume Blin, Guillaume Fertin, Romeo Rizzi, Stéphane VialettePresenter: Guillaume Blin, LINA, France A Parallel Implementation for Determining Genomic Distances under Deletion and Insertionby Vijaya Smitha Kolli, Hui Liu, Michelle Hong Pan, Yi Pan,Presenter: Hui Liu Optimal Group Testing Strategies with Interval Queries and Their Application to Splice Site Detectionby Peter Damaschke, Ferdinando Cicalese, Ugo VaccaroPresenter: Peter Damaschke, Computer Science, Chalmers University, Sweden Wiener Indices of Balanced Binary Treesby Sergey Bereg, Hao WangPresenter: Sergey Bereg, U of Texas at Dallas, USA
Reconstructing Phylogenetic Trees of Prokaryote Genomes by Randomly Sampling Oligopeptidesby Osamu Maruyama, Akiko Matsuda, Satoru KuharaPresenter: Osamu Maruyama, Kyushu University, Japan Phylogenetic Networks, Trees, and Clustersby Luay Nakhleh, Li-San WangPresenter: Luay Nakhleh, Rice University, USA Experimental Analysis of a New Algorithm for Partial Haplotype Completionby Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Lorenzo MarianiPresenter: Paola Bonizzoni, Dipartimento di Informatica Sistemistica e Comunicazione Univer k-Recombination Haplotype Inference in Pedigreeby Francis Y.L. Chin, Qiangfeng Zhang, Hong ShenPresenter: Francis Chin, University of Hong Kong, China Phasing and Missing data recovery in Family Triosby Dumitru Brinza, Jingwu He, Weidong Mao, Alexander ZelikovskyPresenter: Alexander Zelikovsky, Computer Science Deprtment, Georgia State University, USA
An Efficient Dynamic Programming Algorithm and Implementation for RNA Secondary Structure Predictionby Guangming Tan, Xinchun Liu, Ninghui Sun,Presenter: Xinchun Liu, the institute of computing technology, chinese academy of sciences, Simultaneous Alignment and Structure Prediction of RNAs: Are Three Input Sequences Better than Two?by Beeta Masoumi, Marcel TurcottePresenter: Marcel Turcotte, University of Ottawa, School of Information Technology and Engi Improving the Sensitivity and Specificity of Protein Homology Search byby Bin Ma, Lieyu Wu, Kaizhong ZhangPresenter: Bin Ma Profilling and Searching for RNA Pseudoknot structure in Genomesby Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming CaiPresenter: Chunmei Liu SWAT: A New Spliced Alignment Tool Tailored for Handling More Sequencing Errorsby Yifeng Li, Hesham H. AliPresenter: Yifeng Li
Performance Evaluation of Protein Sequence Clustering Toolsby Haifeng Liu, Loo-Nin TeowPresenter: Haifeng Liu, DSO National Laboratories, Singapore String Kernels of Imperfect Matches for Off-Target Detection in RNA Interferenceby Shibin Qiu, Terran LanePresenter: Shibin Qiu, University of New Mexico, Department of Computer Science, USA A New Kernel Based on High-Scored Pairs of Tri-peptides and Its Application in Prediction of Protein Subcellular Localizationby Lei, Z., Dai, Y.Presenter: ZHENGDENG LEI, UNIVERSITY OF ILLINOIS AT CHICAGO, USA Clustering using Adaptive Self-Organizing Maps (ASOM) and Applicationsby Yong Wang, Chengyong Yang, Kalai Mathee, Giri Narasimhan,Presenter: Yong Wang Integrating Text Chunking with Mixture Hidden Markov Models for Effective Biomedical Information Extractionby Min Song, Il-Yeol Song, Xiaohua Hu, Robert B. AllenPresenter: Min Song
Improved Tag Set Design and Multiplexing Algorithms for Universal Arraysby Ion I. Mandoiu, Claudia Prajescu, Dragos TrincaPresenter: Ion Mandoiu, University of Connecticut, USA Highly Scalable Algorithms for Robust String Barcodingby Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alex A. ShvartsmanPresenter: Kishori Konwar, University of Connecticut, USA Virtual Gene: a Gene Selection Algorithm for Sample Classification on Microarray Datasetsby Xian Xu, Aidong ZhangPresenter: Xian Xu, State University of New York at Buffalo, USA A Data-Adaptive Approach to cDNA Microarray Image Enhancementby Rastislav Lukac, Konstantinos N. Plataniotis, Bogdan Smolka, Anastasios N. VenetsanopoulosPresenter: Konstantinos N. Plataniotis, University of Toronto, Canada |