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Efficient algorithms for Local Structural Alignment of proteins considering side-chain conformations

Vamsi Kundeti Sanguthevar Rajasekaran

(vamsik@engr.uconn.edu) (rajasek@engr.uconn.edu)

CSE Department CSE Department

University of Connecticut University of Connecticut

Storrs,CT Storrs,CT

Abstract
Introduction
Problem Definition of Local structural alignment
Structural Alignment algorithm based on Center of Gravity :SACG
Using Algorithm5 for classification of new protein structures
Using Algorithm5 in finding structural motifs
Experimental Results
Accuracy Results
- Experimental results in searching for structural motifs
Bibliography
About this document ...

Vamsi Kundeti 2007-10-10

Vamsi Kundeti		Sanguthevar Rajasekaran
(vamsik@engr.uconn.edu)		(rajasek@engr.uconn.edu)

CSE Department		CSE Department
University of Connecticut		University of Connecticut
Storrs,CT		Storrs,CT